To give you al ittle more insight. Aside from editing and uploading the new INI file I also did the following:
1.) Delete all my cache files. This includes all the files found in the following directories:
2.) Reload from a save point from BEFORE the T3 accesses the computer.
I'm not 100% sure if clearing the cache is necessary but it certainly can't hurt. Reolading form BEFORE the T3 accesses the computer is crucial because that data from the incorrect INI file will, more or less, be present in any gamesave from after that point, causing the glitch.
Hope that clears a few things up.